How to Implement Secure Coding Using Amazon Q in ClickUp

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According to a Consortium for Information & Software Quality study, software defects cost the US economy $2.41 trillion annually, with security vulnerabilities accounting for a significant portion of that waste—a problem that persists as 45% of U.S. companies still report quality issues costing them $1-5 million annually.

This article walks you through implementing secure coding practices using Amazon Q Developer’s AI-powered scanning directly in your IDE. You’ll also learn how to track and remediate those vulnerabilities in ClickUp to close the loop between finding issues and actually fixing them.

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What Is Secure Coding With Amazon Q Developer?

Your team is shipping code, but security scans happen so late in the process that they feel like an afterthought. By the time a vulnerability is flagged, the code has been committed, reviewed, and maybe even deployed.

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This forces your developers to stop what they’re doing, dig through old code they barely remember writing, and try to fix a problem that should have been caught days ago. This constant context switching kills momentum and creates friction between development and security teams.

This is the problem that secure coding with Amazon Q Developer solves. It’s an approach that uses AI-assisted tools to identify and fix security vulnerabilities directly in your integrated development environment (IDE) as you write the code.

This matters for any team shipping production code, whether you’re building internal tools or customer-facing applications. Manual code reviews can’t scale, and standalone security tools often generate noisy, generic alerts that developers quickly learn to ignore.

Amazon Q
via AWS

Amazon Q Developer integrates static application security testing (SAST) directly into your coding workflow. It analyzes your code in real-time, flagging common but dangerous issues before they ever get committed.

  • SQL injection: Prevents attackers from manipulating your database queries
  • Hardcoded credentials: Stops sensitive information like API keys from being exposed in your source code
  • Insecure dependencies: Alerts you to known vulnerabilities in the third-party libraries you use, critical given that malicious packages in open source have risen 156% year-over-year

Amazon Q doesn’t just identify problems—it generates specific remediation code you can review and accept with a single click. Security becomes a natural, helpful part of the development process instead of a frustrating roadblock. Your team can now write more secure code from the start, reducing the time and cost of fixing vulnerabilities later. ✨

Before diving into Amazon Q Developer specifically, it’s helpful to understand the broader landscape of modern coding tools that can enhance your development workflow. This video provides an overview of various vibe coding tools that developers find valuable for improving their productivity and code quality.

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How to Run Security Scans in Amazon Q Developer

Running a scan is the first step, but knowing when and how to scan is what makes the process effective. The goal is to catch issues before they ever reach version control, making your entire development lifecycle more secure.

Amazon Q offers multiple scanning modes to fit your workflow, whether you prefer on-demand checks, continuous background analysis, or automated pipeline gates.

These scans work across a variety of popular programming languages, including Java, Python, JavaScript, TypeScript, C#, Go, Ruby, C/C++, PHP, Kotlin, and Scala, with varying depth of analysis.

Set up Amazon Q Developer in your IDE

First, ensure you have the necessary prerequisites: an AWS account or a free AWS Builder ID for authentication, a supported IDE (such as VS Code, a JetBrains IDE like IntelliJ or PyCharm, or Visual Studio), and properly configured AWS credentials with the permissions required to run security scans.

With those in place, follow these steps to get started:

  1. Open your IDE’s extension marketplace and search for the Amazon Q Developer extension, then install it
  2. Authenticate the extension using your AWS credentials or AWS Builder ID when prompted
  3. Configure your workspace settings to enable security scanning and adjust any preferences
  4. Run a test scan on a single file to verify that the connection is working correctly

If you find that scans aren’t triggering as expected, first check that the file’s programming language is supported by Amazon Q. Next, verify that your AWS credentials are correct and have the necessary IAM permissions for security scanning.

Run project scans and auto-scans

Amazon Q gives you two primary ways to scan your code locally: project scans and auto-scans. Each serves a different purpose in your workflow.

Project scans are manually triggered analyses of your entire codebase or specific directories you select. Think of these as a comprehensive check-up for your code. They are perfect to run before you create a pull request or commit a large set of changes, ensuring you haven’t introduced any new vulnerabilities.

To run a project scan:

  1. Open the Amazon Q panel within your IDE
  2. Select “Run Project Scan” or use the corresponding keyboard shortcut
  3. Choose the scan scope: your full project, a specific folder, or just the files you currently have open
  4. Review the findings that appear in the security findings panel

Auto-scans (available with Amazon Q Developer Pro) provide continuous, real-time feedback by scanning files in the background every time you save them. This catches issues the moment they’re written, preventing them from ever becoming part of a larger problem.

You can enable this feature in your settings to get instant alerts without interrupting your flow. If you find the alerts too noisy during heavy development, you can adjust the sensitivity to only show high-priority findings.

Review and apply security fix suggestions

Finding a vulnerability is only half the battle; you also need to understand and fix it. Amazon Q makes this easy by providing rich context for every finding. Each alert includes:

  • Severity rating: Helps you prioritize what to fix first (Critical, High, Medium, Low)
  • Affected code location: Pinpoints the exact file and line number where the issue exists
  • Risk explanation: Describes why the code is a vulnerability and the potential impact
  • Suggested fix: Provides AI-generated code that remediates the issue

When you’re ready to apply a fix, simply click on the finding to review the detailed explanation and the proposed code change. If the suggestion looks good, you can accept it to apply the fix automatically. For more complex issues related to your specific business logic, you might need to modify the suggestion slightly.

Use the AI-generated code as a reliable starting point, not always the final answer. After applying the fix, you can re-scan the file to confirm the vulnerability is resolved. 🛠️

🎥 Watch this video to learn how to create an effective code review checklist.

Integrate Amazon Q security scans into CI/CD pipelines

While local scans are great for catching issues early, integrating security into your Continuous Integration/Continuous Deployment (CI/CD) pipeline creates an essential security gate. This automated check ensures that no vulnerable code makes it into your main branch or gets deployed to production, which is a cornerstone of any modern AWS DevOps security strategy.

You can add an Amazon Q scanning step to any major build pipeline, including AWS CodePipeline, GitHub Actions, GitLab CI, or Jenkins. The key is to configure it to run automatically on pull requests and commits to your main branch.

Here’s a common configuration:

Pipeline StageScan TypeRecommended Action
Pull RequestIncremental ScanBlock the merge if any critical or high-severity vulnerabilities are found
Main Branch CommitFull Project ScanBlock the build on critical findings, and send warnings for medium-severity ones
Scheduled (Nightly)Comprehensive ScanGenerate a full code scan report for compliance and trend analysis

When setting this up, you need to balance security thoroughness with build speed. Running a full project scan on every single commit can slow down your CI process. A good compromise is to use faster incremental scans on pull requests and reserve full, comprehensive scans for merges to the main branch or for scheduled nightly builds.

Finally, configure your pipeline to export the scan reports in a standard format like SARIF for your compliance and audit trails.

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How to Track Security Vulnerabilities in ClickUp

Finding vulnerabilities with a scanner is a great first step, but it’s useless if those findings get lost in a spreadsheet or a separate ticketing system.

When security alerts live in one tool, development tasks in another, and team communication in a third, you create context sprawl—where teams waste hours hunting for information across disconnected apps. This disconnect is where vulnerabilities fall through the cracks, deadlines are missed, and your security posture weakens.

Chart illustrating work sprawl across disconnected tools and the need to centralize workflows

Eliminate this work sprawl by consolidating your entire vulnerability remediation workflow in ClickUp. This provides a single source of truth where you can turn scan results into actionable tasks with clear ownership, priorities, and deadlines.

Start by creating a dedicated ClickUp List or ClickUp Folder for all security issues. This keeps them organized and visible to the entire engineering and security teams.

ClickUp Custom Fields interface used to capture vulnerability details like severity, component, and CVE links

Stop wasting time manually copying and pasting data between tools. Use ClickUp Custom Fields to capture all the critical information for each vulnerability. You can create fields to track:

  • Severity Level: A dropdown field with options like Critical, High, Medium, and Low
  • Affected Component: A text field to note the file path or service
  • Scan Source: A dropdown to specify if the finding came from Amazon Q, a pipeline scan, or a manual review
  • CVE Reference: A URL field to link directly to the official vulnerability database entry

Next, put your triage process on autopilot with ClickUp Automations. Instead of a manager manually assigning every new ticket, build rules that do it for you.

Build custom ClickUp Automations and eliminate manual tasks throughout your DevOps pipeline: build devops workflows using amazon q
Build custom ClickUp Automations and eliminate manual tasks throughout your DevOps pipeline

For example, an Automation can be triggered whenever a new task is created: if the severity is “Critical,” the task is automatically assigned to a senior developer with an urgent due date. If it’s “Medium,” it can be added to the next sprint’s backlog.

Gain immediate insight into your team’s security debt—a problem affecting 50% of organizations according to recent research—without digging through hundreds of tasks by visualizing your security data in real-time with customizable ClickUp Dashboards.

Turn complicated metrics into detailed visuals with ClickUp Dashboards
Visualize team activities and security metrics in real time with ClickUp Dashboards

You can build charts showing open vulnerabilities by severity, the average age of open tickets, or which team members have the most assigned fixes. This gives engineering managers the high-level view they need to spot trends and allocate resources effectively.

To ensure developers have all the information they need, use ClickUp Task Dependencies. When Amazon Q flags an issue, create a ClickUp Task and link it back to the original finding. You can paste the file path, line number, and suggested fix directly into the task description. This gives developers full context without forcing them to switch between tools.

ClickUp Custom Task Statuses configured to track vulnerability remediation stages from new to verified

Finally, track the complete lifecycle of a vulnerability with ClickUp Custom Statuses. A typical workflow might be: New → In Review → In Progress → Fixed → Verified. By adding a final “Verified” step, you ensure that a second scan is run to confirm the fix works before the task is officially closed, creating a closed-loop process where nothing is left to chance. 🙌

And with ClickUp Brain, the integrated, contextual AI within ClickUp, your team doesn’t have to keep searching for information. Just ask Brain a question, and it’ll search your tasks, files, chats, and connected apps to surface the info you need!

ClickUp Brain: Answering task-specific questions in natural language; software development
Search through your tasks, docs, and chats in ClickUp and ask natural language questions with ClickUp Brain

💡 Pro Tip: ClickUp’s Codegen AI Agent can help identify issues in code without you needing to move out of your Workspace. It can:

  • Scan code for known risky patterns
  • Flag common correctness issues
  • Enforce conventions
  • Highlight logic bugs, security gaps, and more
ClickUp Codegen
ClickUp Codegen is your 24/7 coding teammate within ClickUp
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Best Practices for Secure Coding Workflows

Even the best security tools will fail if your team doesn’t have the right habits and workflows in place. If developers ignore findings, or fixes are allowed to pile up in an endless backlog, your investment in scanning tools is wasted. Building sustainable practices makes security a natural part of your team’s daily routine.

Here are some best practices to build a strong, secure coding workflow:

  • Scan early, scan often: Don’t wait for the CI/CD pipeline to catch issues. Encourage your team to run security scans locally before they even commit their code. This is a core tenet of the shift-left approach: catching a vulnerability in the IDE means a faster fix and fewer blocked builds down the line
  • Set severity-based SLAs: Not all vulnerabilities are created equal. Define clear service-level agreements (SLAs) for response times based on severity. For example, critical vulnerabilities require a fix within 24 hours, while low-severity issues can be addressed in the next sprint
  • Make fixes part of the definition of done: A feature or user story isn’t truly “done” until all related high-severity security findings are resolved. Build this expectation directly into your team’s workflow and checklists
  • Review suppressed findings regularly: Your team will inevitably suppress some findings as false positives or accepted risks. However, these decisions shouldn’t be permanent. Schedule a quarterly review to ensure these suppressions are still valid and don’t pose a new risk
  • Track trends, not just counts: A dashboard that simply says “47 open vulnerabilities” isn’t very helpful. A dashboard that shows “critical findings have increased by 20% this month” is. Use ClickUp Dashboards to spot meaningful patterns over time and address root causes
  • Pair security with code review: Make security a standard part of your pull request review process. The reviewer should check that the code is clean and that any new security scan findings have been addressed.
  • Document your exceptions: In some cases, you may not be able to fix a vulnerability immediately, especially in legacy code or third-party dependencies. When this happens, document the risk and any mitigating controls in the associated ClickUp Task. Your future self will thank you for the context

💡 Pro Tip: Enforce these best practices consistently using ClickUp.

  • Keep your team’s secure coding standards and exception policies easily accessible to everyone by storing them in ClickUp Docs
  • Ensure your quarterly security reviews and suppression audits never get forgotten by setting up ClickUp Recurring Tasks to automatically create tickets
  • Draft security documentation faster or summarize vulnerability trends from your task data using ClickUp Brain. 📚
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Build a Secure Coding Workflow in ClickUp

Secure coding isn’t a one-time task or a separate phase of development—it’s a continuous practice that should be woven into the fabric of how your team writes, reviews, and ships code. By bringing vulnerability scanning directly into the IDE with Amazon Q Developer, you catch issues at the earliest possible moment, when the code is still fresh in a developer’s mind. The AI-generated fix suggestions turn security from a chore into a collaborative part of the creative process.

This approach works best when scanning happens in the IDE where developers already work. By connecting all your work in a converged workspace like ClickUp, you create a closed-loop system where nothing falls through the cracks. Automation handles the repetitive, administrative parts of the process, like triggering scans and routing findings. This frees your team to focus on the high-impact judgment calls that require human expertise.

Teams that build security into their daily workflow spend less time fixing urgent issues and more time building new features.

Ready to close the loop between finding and fixing? Get started for free with ClickUp to build your secure coding workflow. ✨

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Frequently Asked Questions

Can Amazon Q Developer scan all programming languages?

Amazon Q supports many major languages, including Java, Python, JavaScript, and C#, but the depth of security analysis can vary depending on the language and its known vulnerability ecosystem.

How do I handle false positives from security scans?

Use suppression rules within the tool for confirmed false positives, and be sure to document the reasoning in your ClickUp Task so the decision is clear to future team members.

Should security scans block our CI/CD builds?

A common best practice is to configure your pipeline to block builds on critical and high-severity findings. Show warnings for medium and low issues to balance security with development velocity.

How often should our team review its security backlog?

Review open vulnerabilities weekly as part of your sprint planning. Conduct a deeper audit of suppressed findings and overall security trends on a quarterly basis./

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